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African Crop Science Journal
African Crop Science Society
ISSN: 1021-9730
EISSN: 1021-9730
Vol. 24, No. s1, 2016, pp. 63-71
Bioline Code: cs16015
Full paper language: English
Document type: Research Article
Document available free of charge

African Crop Science Journal, Vol. 24, No. s1, 2016, pp. 63-71

 en Phylogenetic diversity of cassava green mite, Mononychellus progresivus check for this species in other resources from different geographical sites in East Africa
Mutisya, D.L.; Molo, R.; El-Banhawy, E.M.; Miano, D.; Kariuki, C.W.; Owiti, A. & Aool, W.

Abstract

Cassava green mite (CGM) of the Mononychellus check for this species in other resources genus is an invasive species in Africa, introduced from South America. Its phylogenetic diversity over geographical localities has never been assessed in East Africa, where mite density dynamics oscillate from few individuals to a peak of hundreds. The objective of this study was to determine CGM species comparative phylogenetic diversity from seven distinct geographical sites in East Africa. Six sites were sampled for CGM races, two samples from each country. DNA was extracted on internal transcribed spacer 2 (ITS2) and cytochrome oxidase subunit I (COI), and compared for phylogenetic variations of CGM from different locations of East African region. A comparative search from the NCBI Gene bank resulted into identical species nucleotides from Congo and Benin. Sequences from the two sites in Kenya were 99-100% similar to CGM nucleotide from the Congo-Benin accessions (X79902.1) on ITS2 gene region. On COI, a 98-99% site sequences similarity was observed on M. progresivus check for this species in other resources accession X79901.1. A closely related divergence of specimens collected from Tanzania and Uganda was determined. Both Uganda and Tanzania had 99% match to X79901.1 on COI region. Similarly, the Uganda and Tanzania samples had 99% match to emb/X79902.1 on the 18Sr RNA region. The CGM sequence from coastal Kenya had the highest phylogenetic divergence from the Congo-Benin sequences. A small biogeographic phylogenetic divergence (0-1%) was evident from the analyses among the six collection sites. The results confirm M. progresivus identity in East Africa it also indicates intra-species phylogenetic variations on the COI gene region of interest.

Keywords
Benin; Congo; Kenya; Mononychellus progresivus

 
 fr
Mutisya, D.L.; Molo, R.; El-Banhawy, E.M.; Miano, D.; Kariuki, C.W.; Owiti, A. & Aool, W.

Résumé

L’acarien vert du manioc (CGM) du genre Mononychellus check for this species in other resources est espece invasive Introduite de l’Amerique du Sud en Afrique. Sa diversite phyllogenetique au sein et entre les localites n’a jamais ete evaluee en Afrique de l’Est, ou la densite d’acarien varie de quelques individus a plusieurs centaines. L’objectif de cette etude etait de determiner la diversite phyllogenetiques des especes CGM et de comparer sept sites geographiquement differents en Afrique de l’Est. six sites ont ete echantillonnes pour des races de CGM, a raison de deux echantillons par pays. De l’AND a ete extrait sur l’espaceur interne transcrit 2 (ITS2) et sous-unite I de cytochrome oxidase (COI), ces echantillons ont ete compares pour les variations phyllogenetiques de CGM provenant de localites differentes de la region Est Africaine. Une etude comparee a la banque de gene de NCBI a revele des especes identiques en provenance de Congo et du Benin, de point de vue de leur nucleotides. Des sequences provenant des deux sites au Kenya ont exhibe 99-100% de similarite avec les nucleotides de CGM provenant des accessions Congo-Benin (X79902.1) sur la region genetique ITS2. Sur COI, une similarite de 98-99% a ete observee sur l’accession M. progresivus check for this species in other resources X79901.1. Une divergence de sujets genetiquement proches a ete observe chez des specimens collectes en Tanzannie et en Ouganda. Ouganda et Tanzanie ont exhibe 99% de similitude a X79901.1 sur la region COI. De meme, les echantillons provenant de Ouganda et de Tanzannie presentaient 99% de similitude avec emb/X79902.1 sur la region 18Sr RNA. La sequence de CGM provenant de cote kenyane avait la divergence phyllogenique la plus elevee d’avec les sequences Congo-Benin. Une legere divergence phyllogenetique geographiaque (0-1%) a ete note des analyses dans les sites de collection. Les resultats conferment l’identite de M. progresivus identity en Afrique de l’Est. l’etude a aussi revele des variations phyllogenetiques sur la region de gene d’interet COI.

Mots Clés
Benin; Congo; Kenya; Mononychellus progresivus

 
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