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International Journal of Environment Science and Technology
Center for Environment and Energy Research and Studies (CEERS)
ISSN: 1735-1472 EISSN: 1735-2630
Vol. 6, Num. 4, 2009, pp. 651-662

International Journal of Environment Science and Technology, Vol. 6, No. 4, Autumn, 2009, pp. 651-662

Spatial distribution and assemblage structure of macrobenthos in a tidal creek in relation to industrial activities

1*N. Mooraki; 2A. Esmaeli Sari; 3M. Soltani; 4T. Valinassab

1Department of Natural Resources, Science and Research Branch, Islamic Azad University, Tehran, Iran
2Department of Fisheries, Faculty of Natural Resources and Marine Science, Tarbiat Modares University,
Noor, Iran
3Department of Aquatic Animal Health, Faculty of Veterinary Medicine, University of Tehran, Tehran, Iran
4Iranian Fisheries Research Organization, P.O. Box: 14155-6116, Tehran, Iran

*Corresponding Author Email: Tel.: +9821 8890 1411; Fax: +9821 8892 6795

Received 13 December 2008; revised 5 June 2009; accepted 3 August 2009

Code Number: st09072


The impact of petrochemical special economic zone activities on the health status of Jafari Creek was studied by assessing the changes in macroinvertebrate assemblages in nine sites during September 2006- January 2008. The relationship between spatial pattern of macroinvertebrate assemblages and ambient factors (i.e. water temperature, salinity, pH, dissolved oxygen, sediment grain size distribution, sediment organic content, heavy metals contents) was measured. Background enrichment indices, contamination factor and contamination degree, were used to assess the health status in the study area based on nickel, lead, cadmium and mercury contents of the sediments. The macrobenthic communities had a low diversity and were dominated by opportunistic taxa. The BIO-ENV analysis identified salinity, dissolved oxygen, pH and silt/clay content of sediments as the major environmental variables influencing the infaunal pattern. This suggests that management should attempt to ensure minimal disturbance to environmental variables underlying the spatial variation in macroinvertebrate assemblages. Background enrichment indices showed that the health of Jafari Creek has declined over time due to the constant discharge of heavy metals to the Creek system. These indices also identified a significant degree of pollution in the study area. The decrease in the ecological potential of Jafari Creek was best highlighted by the alteration in macrobenthic assemblages.

Keyword: Anthropogenic activities; Background enrichment indices; Environmental variables; Pollution detection; Heavy metals; Variation of soft bottom macrofauna communities


Estuaries are important marine ecosystems by maintaining the coastal biota, being one of the highly productive systems and serving as breeding and nursery grounds for a diverse array of organisms (Dobson and Frid, 1998; Currier and Small, 2005; Karbassi et al., 2008). Urbanization and industrialization have imposed a heavy burden on estuarine ecosystems. The health of estuaries has largely declined as a result of direct discharge of waste from adjacent industrial and municipal sources and urban run-off (Kennish, 1991). A wide variety of environmental monitoring programs have been conducted to evaluate the degree of alteration occurring in estuaries. Earlier studies have shown that the distributional patterns of macrobenthos are closely linked to environmental factors (Thrush, 1991; Morrisey et al., 1992; Macfarlane and Booth, 2001; Morrisey et al., 2003; Currier and Small, 2005; Nouri et al., 2008). Accordingly, the study of alterations in macrobenthic communities has been suggested as an appropriate biological indication of environmental stress (Bilyard, 1987;Ysebaert and Herman, 2002; Ysebaert et al., 2002; Morrisey et al., 2003). Numerous studies have demonstrated links between spatial variation in the environment and/or habitats and spatial variation in the benthic community in aquatic systems. For example, Gaston and Nasci (1988), Gray et al. (1988) and Raut et al. (2005) found significant correlations among abiotic factors such as salinity, pH, sediment characteristics and dissolved oxygen with distributional patterns of macrobenthic communities. Earlier studies have shown that benthic assemblages may be largely affected by anthropogenic activities. For example, Inglis and Kross (2000) found significant alteration in macroinvertebrate assemblages of an estuarine system subjected to urbanization. Accordingly, Mucha et al. (2003) and Courtenay et al. (2005) found considerable changes in macrofauna assemblages in Douro estuary (Portugal) and Sydney estuaries (Australia), respectively, due to anthropogenic activities. The conclusions from all of these studies have been that the proper assessment of sediment contamination and ambient factors in estuaries and their effects on macrobenthos assemblages and composition is a beneficial method for evaluating the health of these ecosystems. During the last two decades or so, Mahshahr Creeks in Musa Bay has become one of the main economic assets of the north-west coast of the Persian Gulf, serving a variety of industrial activities (Fig. 1). Despite some early endeavors which generally focused on identifying estuarine macroinvertebrates to the higher taxonomic levels (e.g. Nabavy, 1992; Parsamanesh, 1994), the subtropical tidal communities, the structure of macrobenthic assemblages and their spatial variation in Mahshahr Creeks have largely remained unknown. This is especially the case in Jafari Creek which has been subjected to anthropogenic activities since 1993. In this year, the construction of petrochemical special economic zone (PETZONE) in an area of about 17 Km2, followed by the inception of petrochemical activities of the complexes situated in this zone, affected some parts of Mahshahr Creeks ecosystem. One of the worst affected areas is Jafari Creek. In this regard, to assess the health status of Jafari Creek, the present study based on three main objectives, has been conducted in this area. The primary objectives of the present study were to explore the community structure and spatial pattern of benthic macroinvertebrates in Jafari Creek, as well as exploring the relationship between the spatial pattern of macroinvertebrates with environmental variables (i.e. water temperature, salinity, pH, dissolved oxygen, sediment particle size distribution, sediment organic matter, heavy metals content). A further objective was to use Background Enrichment indices to assess the extent to which the health of Jafari Creek has declined due to the inputs of heavy metals. In this respect, the macrobenthos assemblages and environmental variables were sampled in Jafari Creek from September 2006 to January 2008.


This study was undertaken at Jafari Creek located in Mahshahr Creeks, which is connected to the Musa Bay, north-west of the Persian Gulf (Fig.1). Jafari Creek, with an area of about 5.1 km2, is a subtropical tidal creek with tidal range of 0.8-5.1m surrounded by a vast muddy expanse (Niyyati and Maraghei, 2002). This Creek receives irregular fresh water following the seasonal precipitation of about 100-300 mm/y occurring mainly from November to February (Niyyati and Maraghei, 2002). In 1993, an area of about 1.22 km2 of the Jafari Creek was isolated and 0.8 km2 drained off for construction of PETZONE. The remaining area (0.41km2) is used as sewage and post treatment waste receptor. Sewage and post treatment waste runs into the main body of the Creek through a connective canal which is opened only during low tide (Fig. 1). Samples (i.e. macroinvertebrates and environmental variables) in submerged depositional substrates of Jafari Creek were collected from nine sites. The Sites were selected in a way to encompass the entire area with the similar characteristics on the basis of general appearance and sediment particle size distribution. Moreover, the choice of sites was also influenced by accessibility, logistics and safety considerations. Sites 1 and 2 were placed inside the PETZONE boundaries with 1.85 and 1 km distance away from the connective canal. Sites 3, 4 and 8 were situated respectively 0.8, 1.5, and 1.25 Km from the connective canal, out of the PETZONE boundaries. Sites 5, 6, 7 and 9 were located out of the PETZONE far from connective canal. The distance of the aforementioned sites is respectively 2, 3.1, 3.25 and finally 3.5 Km away from the mentioned canal (Fig. 1). Samplings were performed from September 2006 to January 2008 every 50 days and conducted within 2 h after high tide. Sediment samples were taken using an Eckman grab. The sampler collects a piece of sediment with an area of 225 cm2, a thickness of 5-15 cm weighing about 600-2000 g. The number of replications of sediment samples collected for biota analysis was determined by a pilot study that revealed three replications provided means with acceptable precision (i.e. standard error/mean £ 0.1 (Andrew and Mapstone, 1987)) for species richness. Accordingly, three sediment samples were taken from each of the nine sites for macroinvertebrate analyses. Collected sediments were sieved through a 0.5 mm mesh and retained macroinvertebrates were preserved in 7 % formalin buffered in sea water, followed by 70 % ethanol with rosebengal for sorting. Samples were sorted under a dissecting microscope using 16 × magnification and all macroinvertebrates identified to the lowest possible taxonomic level, often to family level, by use of systematic and classification keys (Ponder et al., 2000; e.g. Martin and Davis, 2001; Todd, 2001; Glasby and Fauchald, 2002). Previous studies have shown this level of taxonomic resolution to be cost-effective and sufficient for detecting effects associated with a variety of anthropogenic disturbances (Warwick, 1988; James et al., 1995; Chapman, 1998). Three additional sediment samples were collected from each of nine sites and each sample was divided into three parts for sediment particle size distribution, total organic matter and heavy metals (i.e. nickel, lead, cadmium and mercury) content analyses. In order to determine sediment particle size distribution, the first part of each sample was dried at 70 ºC for 48 h and sieved through a nested series of sieves. The sediments were partitioned into gravel % (2.0 mm), sand % (0.063 mm) and silt/clay % (< 0.063 taxonomic level, often to family level, by use of systematic and classification keys (Ponder et al., 2000; e.g. Martin and Davis, 2001; Todd, 2001; Glasby and Fauchald, 2002). Previous studies have shown this level of taxonomic resolution to be cost-effective and sufficient for detecting effects associated with a variety of anthropogenic disturbances (Warwick, 1988; James et al., 1995; Chapman, 1998). Three additional sediment samples were collected from each of nine sites and each sample was divided into three parts for sediment particle size distribution, total organic matter and heavy metals (i.e. nickel, lead, cadmium and mercury) content analyses. In order to determine sediment particle size distribution, the first part of each sample was dried at 70 ºC for 48 h and sieved through a nested series of sieves. The sediments were partitioned into gravel % (2.0 mm), sand % (0.063 mm) and silt/clay % (< 0.063 sites during the sampling procedure using WTW conductimeter. Data analyses were undertaken using PRIMER version 6 (Plymouth Marine Laboratories, Clarke and Warwick, 2001) and SPSS version 13. The hypothesis states that, the spatial patterns in the number of species were divided with respect to industrial activities was explored by measuring the relative Bray-Curtis similarity of assemblages at the study area and was depicted using non-metric multidimensional scaling (nMDS). The hypothesis that macroinvertebrate assemblages differ among sites was tested using analysis of similarity (ANOSIM) to determine whether any observed differences in macroinvertebrate assemblages were statistically significant. The contribution of specific taxa to the differences in macroinvertebrate assemblages among sites was examined using SIMPER analysis. The Mean abundance of macroinvertebrates was 4th root transformed to reduce the influence of very abundant species. The relative Euclidean dissimilarity of sites based on their environmental variables was delineated using nMDS of log (x+1) transformed environmental data. The objective as to, which environmental variable and to what extent was affected the composition of macroinvertebrate assemblages and their spatial pattern, was evaluated by BIOENV routine, which is based on weighted Spearman rank correlations between the similarity matrices of the two data sets. The total abundance, taxonomic richness, and Shannon-Wiener diversity index were measured using diverse routine in PRIMER. Differences in environmental variables among sites were tested using the non-parametric Kruscal-Wallis test in SPSS version 13. To assess the extent to which the health of Jafari Creek has declined due to inputs of heavy metals, Background Enrichment indices, including Contamination factor and Contamination degree, were calculated for the study area. The contamination factor (Cf) is defined as the contamination of a given toxic substance in a basin as below (Hakanson, 1980; Kwon and Lee, 1998):

Cf = Ce / Cpi

Where, Ce is concentration of element in sediment samples and Cpi is preindustrial reference value (natural reference) for the element. In this regard, Cf <1 represents a low contamination factor (indicating low sediment contamination of the studied factor), 1d" Cf <3 represents a moderate contamination factor, 3d" Cf <6 represents a considerable contamination factor and Cf ³ 6 represents a very high contamination factor (Hakanson, 1980; Asku et al., 1997; Nasr et al., 2006; Dehgan et al., 2008). The degree of contamination (Cd) is defined as the sum of all contamination factors for various heavy metals (Hakanson, 1980; Kwon and Lee, 1998):

Cd= ∑nCf

In this regard, Cd<7 represents a low degree of contamination, 7d" Cd <14 represents a moderate degree of contamination, 14d" Cd < 28 represents a considerable degree of contamination and Cd ≥ 28 represents a very high degree of contamination indicating serious anthropogenic pollution (Hakanson, 1980; Asku et al., 1997; Nasr et al., 2006; Dehgan et al., 2008). The mean concentration of each heavy metal from all sites was compared with acceptable quantities of heavy metals for unpolluted areas suggested by NOAA (National Oceanic and Atmospheric Administration) and ISQGs (Interim Sediment Quality Guidelines) (Long et al., 1995; Buchman, 1999; CCME, 1999).


A total of 227745 macroinvertebrates were sampled, representing three phyla, five classes and 32 families. Polychaetes were the most diverse class with 16 families mainly dominated by Glyceridae followed by Cossuridae, Eunicidae, Nereidae and Onuphidae (Table 1). Polychaetes comprised 62.12 % of the total number of individuals, followed by bivalvia (18.00 %), crustaceans (12.20 %) and gastropoda (7.73 %). A significant difference was found in invertebrate assemblages among sites, as in sites one and two, situated in the surrounding area, no macroinvertebrate individual was found during the sampling period and the other seven sites showed a variable composition of macrobenthic communities (Table2). The sites which were situated out of the PETZONE boundaries (i.e. sites 3 to 9) were dominated by polychaetes followed by molluscs. Faunal assemblages in sites 8 and 9 were respectively distinguished by large densities of Veneridae and Postamididae (molluscs) followed by Tanaidaceae (crustacean) and Eunicidae (polychaetes), whereas the remaining five sites were dominated by polychaetes (Table 3). The marked variation in macrobenthos abundance among sites was delineated clearly with differences between sites located in PETZONE boundaries and those outside. These results are supported by nMDS (Fig. 2). Such a break down in spatial pattern of macrobenthos is largely controlled by abundant number of polychaetes and few numbers of molluscs which are also indicated by their contribution percentage as it shown in Table 3.Average density, species richness, Shannon-Wiener diversity and evenness indices were accounted for 2530.5 ind/m2 (ranging 0-49751 ind/m2), 1.35 ± 0.63, 1.44 ± 0.38 and 0.70± 0.39, respectively in the study area. The highest density, species richness, evenness and Shannon- Wiener indices were found in sites 6, 9, 5 and 9, respectively (Fig. 3). The outer sites possessed high density and species richness of macroinvertebrates along with Shannon-Wiener diversity and evenness indices. Water salinity was significantly variable within the Creek, with hyper-saline condition in sites 1 and 2 with maximum of 345 and 318 (Table 4).Water temperature was not significantly different among outer sites, but showed a significant difference between sites located in PETZONE and the outer sites (Table 4).

Dissolved oxygen was significantly different between sites 1 and 2 and that of other sites. Anoxia condition was measured at site one (Table 4). The pH was significantly different among sites located outside of the PETZONE (Table 4). Total organic content in sediment showed a high variability among the outer sites (Table 4). Sediments were generally dominated by medium to very fine particles and did not show significant differences among the outer sites (P > 0.85). In sites 1 and 2, the substrate was entirely dominated by crystallized salts and petrochemical residuals. The substrate in sites 3, 4 and to some extent in site 8 located near the PETZONE were composed of fine sand and silt especially in site three which was dominated by silt (Table 5). These results are supported by non metric multidimensional scaling ordination (nMDS) (Fig. 4). The BIOENV results showed that variation in the macroinvertebrate assemblages were correlated with salinity, dissolved oxygen, pH and silt/clay content of sediments (BIOENV, pw= 0.68). The highest mean concentrations of cadmium (2.84 ± 0.25 ppm) and lead (7.69 ± 0.28 ppm) were recorded in site two, and the highest mean value for mercury (1.09 ± 0.07 ppm) and nickel (63.6 ± 2.52 ppm) were found at site 3 (Fig.5). The results of the Kruskal-Wallis test showed significant difference only in lead concentration between sites located in PETZONE (i.e. sites one and two) and those located out of the PETZONE (i.e. sites 3 to 9) (Table 6). Mean concentrations of mercury and nickel were higher than the acceptable quantities for unpolluted areas suggested by NOAA (National Oceanic and Atmospheric Administration) and ISQGs (Interim Sediment Quality Guidelines) (Long et al., 1995; Buchman, 1999; CCME, 1999). Mean concentration of lead and cadmium were under acceptable quantities for unpolluted areas (Table 7). The contamination factor was calculated for nickel, lead, cadmium and mercury. Results showed that mercury and cadmium were respectively the most responsible elements in polluting the sediments of the study area (Table 8). This is further supported by the calculation of the contamination degree for the studied area, which shows a considerable degree of contamination which resulted from the cumulative effect of four sampled elements (Table 8). At small spatial scales, patterns of macroinvertebrate distribution have been shown to be controlled by variation in underlying environmental variables (Barry and Dayton, 1991; Thrus et al., 1996; Inglis and Kross, 2000; Chapman, 2002; Mikac et al., 2007). In the present study, significant correlations were found between macroinvertebrate assemblages and salinity, dissolved oxygen, pH and silt/clay content of sediments. Human activities are likely to alter these variables which resulted in changes in taxonomic composition and variation in the abundance of individual taxa (Warwick and Clarke, 1993). This suggests that management should attempt to ensure minimal disturbance to environmental variables underlying the spatial variation in macroinvertebrate assemblages by executing careful assessment programs. The present study demonstrated that anthropogenic and industrial disturbances have exerted a significant effect on environmental factors and benthic macroinvertebrates of Jafari Creek. The most noteworthy effects on habitat have been made through: (1) reductions in total areas of inhabitable substrate available to macroinvertebrate and (2) the development of hyper-saline, anoxia conditions and alteration of the characteristics of sediments especially in sites situated in PETZONE. Water quality and sediment characteristics in Jafari Creek have largely declined due to: 1) long term closure of the connective canal during high tide, 2) consequent loss of sea water intrusion, 3) increased salt loads in the water column caused by high evaporation and low precipitation rates and 4) long term discharge of post treatment wastes into the surrounding sites. All these alterations probably have made the substrate uninhabitable for benthic macroinvertebrates. This was indicated by the absence of macroinvertebrates in surrounding sites. In contrast, in sites located out of the PETZONE boundaries, macroinvertebrates appeared in most diverse communities, where hyper-saline, anoxia conditions and habitat loss were less severe. The ecological effects of habitat fragmentation in Jafari Creek have resulted in discontinuous nutrient and organic matter flows between adjacent habitats. Earlier study has also suggested habitat fragmentation as an effective factor for declining interchange of macrofaunal larvae within the system (Eckman, 1996). The results of this study showed that macroinvertebrate compositions in the outer sites were numerically dominated by opportunistic polychaetes while crustaceans, bivalves and amphipods possessed lower abundances Consequently, the industrial activities in Jafari Creek have affected macroinvertebrate assemblages, which is indicated by decreased taxonomic richness, diversity and evenness followed by an increase in abundance of opportunistic taxa. The results are in agreement with the findings by Inglis and Kross (2000), who observed obvious macrofaunal changes caused by urbanization. Sediment characteristics may also have influenced the variations in community composition of invertebrate assemblages. The sites sampled in this study did not cover a wide range of sediment types. The dominant composition of sediments in general was fine materials with significant content of silt and clay, except in sites 1 and 2. Fine materials with larger surface to volume ratio have greater potential to scavenge both inorganic and organic matters from the water column (Macfarlane and Booth, 2001; Burone et al., 2003; Silvia et al., 2006; Dehghan et al., 2008; Spruzne et al., 2008). The relative content of total organic matter across the study area was high and resulted in the appearance of abundant assemblages of deposit feeding polychaetes, but lacked filter- feeding bivalves and other molluscs common in the areas with fewer organic matters. Earlier studies have shown a general trend toward reduced faunal and trophic diversity, abundant short-lived opportunistic taxa with smaller body sizes, and fewer deep-dwelling species in contaminated sediments (Warwick and Clarke, 1993; Ward and Hutching, 1996; Rakocinski et al., 1997; Inglis and Kross, 2000). In the present study, macroinvertebrates showed both increased and decreased variability in the number of taxa in response to gradients in pollution, depending upon whether the groups involved were positively or negatively affected by sediment quality.

Polychaetes were positively associated with contaminated sediments in outer sites and exhibited greater abundance in comparison to bivalves, gastropods and crustaceans which showed a heterogeneous distribution in the study area, as shown by the results of SIMPER routine that average number of polychaetes per square meter in all sites (i. e. sites 3 to 9) was larger than that of bivalves and crustaceans. The overall changes in macroinvertebrate assemblages structure are frequently characterized by a move from domination of crustaceans and suspension- feeding molluscs to assemblages with proportionately greater abundance of deposit-feeding polychaetes such as Glycerids, Eunicids, Cossurids and Serpulids. Sites 1 and 2 with the most severe condition among the other sites were devoid of any macroinvertebrate individuals and sites 3 and 4, near the connective canal, with the highest mean value of mercury and nickel, respectively were dominated by Glycerids and Eunicids. Site 8 was dominated by large density of Venerid, bivalves, which may be due to the presence of artificially planted mangrove trees (Avecina marina). The presence of mangroves has probably facilitated the presence of higher densities of macroinvertebrates by water purification. Site 9 as the farthest site from the PETZONE boundaries was dominated by diverse macroinvertebrates and particularly molluscs. In terms of accumulation of inorganic matter in sediments, the spatial variation in the structure of fauna was concordant with similar, creek-wide variation in sediment concentrations of heavy metals. Concentrations of mercury and nickel in Jafari Creek were higher than acceptable quantities for unpolluted areas as suggested by NOAA (National Oceanic and Atmospheric Administration) and ISQGs (Interim Sediment Quality Guidelines) (Long et al., 1995). The contamination degree calculated for Jafari Creek (16.7) was higher than that measured for other Mahshahr Creeks as measured in an earlier study by Dehghan et al., 2008 showing contamination degree calculated as 16.22 for Ghannam, 10.35 for Dorag, 10.42 for Ghazale, 12.09 for Ahmady, 10.14 for Patil, 11.05 for Darvish, 11.41 for Zangy and 8.74 for Bihad. This suggests that the health of Jafari Creek has declined over time. It appears necessary to say that the contemporary assemblages of macroinvertebrates have been affected considerably by the presence of a variety of toxicants in the system during the period of exposure as it was shown in an earlier study by Landis et al. (1997).


In the present study, information about macrobenthic community assemblages and their relationship to environmental variables provides important baseline data which may be useful for assessing future environmental changes. The identification of a suite of environmental variables underlying the spatial variation in macroinvertebrate assemblages suggests that management should attempt to ensure minimal disturbance to their natural patterns of variation in environmental variables. The present study also showed that the ecological capacity of Jafari Creek, as a branch of Mahshahr Creeks, has largely been diminished due to industrialization. The current study also clearly showed an alteration in macroinvertebrate assemblage in response to industrial activities in the vicinity of PETZONE in Jafari Creek. In this regard, change in species composition of macrobenthos is suggested as a more reliable tool in determination of the status of alterations than the diversity indices alone.


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